Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916129.1_cds_XP_016465820.1_58737
CDS Infomation

[gene=LOC107788639] [db_xref=GeneID:107788639] [protein=protein CLP1 homolog] [protein_id=XP_016465820.1] [location=complement(join(7361..7448,7542..7586,8094..8329,8500..8634,10905..10961,11056..11194,11343..11584,12906..12998,13126..13194,14339..14554))] [gbkey=CDS]
Sequence

ATGGCTTATGGAGGCACAAATGTCAATCCATTGGCAGCAACAGGTGTTTCAACATCTGTG
AGACAGGTGAAGCTGGATAAAGAATGTGAGCTCCGAATTGAAACCAGCCTTGACTCGCCC
CTCCGTCTCCGACTCCTCACTGGAACAGCTGAGATTTTTGGGACTGAAATCCCTCCTGAG
ATCTGGCTTACCATCCCTCCAAGACTCAAATTTGCTGTTTTTACTTGGTATGGAGCGACA
ATCGAGATGGATGGTCCCACTGAAACTGATTATACAGCAGATGAGACGCCGATGATAAGT
TATATAAATGTTCATGCTGTACTTGATGGACGAAGAAATCGTGCCAAAGCTTCACCTAGT
GATTCTGACACTTCTCAGGGCCCGAGGGTAGTCGTTGTGGGACCTACAGATTCTGGCAAG
AGTACTTTATCAAGGATGCTTCTTAGTTGGGCAGCAAAACAGGGATGGAAACCTACTTTT
GTGGATTTGGACATTGGTCAAGGATCGATAACTATTCCAGGATGTGTTGCTGCTACGCCA
ATTGAGTTGCCTATTGATCCAGTTGAAGGAATTCCACTTGAAATGCCTATGGTCTACTTC
TTTGGTCATGTGACTCCTAGTGCCAACATAGATCACTACAAGGTACTCGTCAAGGAGCTA
GCTCAGACTCTGGAGAGGCAATTTTCTGGCAATGCTGAATCTCGAGCTTCAGGCATGGTA
ATAAATACAATGGGATGGATAGAGGGAGTTGGTTATGAGTTGCTACTCCATGCGATTGAT
ACATTCAATGCCACAGTTATTCTTGTCTTGGGTCAGGAAAAACTTTGTAGCATGCTAAAA
GATGTATTGAAGAATCGGCCTAATGTGGATGTGGTGAAACTTCAAAAGTCTGGTGGTGTT
GTATCAAGGAATGCAAAAGTACGCCAGAAAGCAAGGGGCTACAGAATAAGGGAGTACTTT
TATGGCCCTTCAAATGACCTCTCACCACATTCTAATGTAGTAAACTTCGGTGACTTGTTC
ATCTACCGAATTGGGGGTGGACCACAGGCTCCACGCTCAGCTTTACCTATTGGTGCAGAG
CCTGCTGCAGATCCTACAAGATTGGTTCCTGTTAGTATCAACCGGGACTTGCTTCATTTG
GTTCTTGCCGTCTCGTATGCCGATGAACCAGATCAAATAATTTCCAGTAATGTTGCCGGA
TTCATCTATGTCACAGACGTTGACATGCATAGGAAAAAGATAACATATCTTGCACCATGT
GCTGGGGAACTTCCGAGCAAATACCTAATCGTGGGAACCTTAACATGGATTGAAAACTGA

Peptide Sequence

PEP ID

XP_016465820.1
PEP Infomation

PREDICTED: protein CLP1 homolog [Nicotiana tabacum]
Sequence

MAYGGTNVNPLAATGVSTSVRQVKLDKECELRIETSLDSPLRLRLLTGTAEIFGTEIPPE
IWLTIPPRLKFAVFTWYGATIEMDGPTETDYTADETPMISYINVHAVLDGRRNRAKASPS
DSDTSQGPRVVVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCVAATP
IELPIDPVEGIPLEMPMVYFFGHVTPSANIDHYKVLVKELAQTLERQFSGNAESRASGMV
INTMGWIEGVGYELLLHAIDTFNATVILVLGQEKLCSMLKDVLKNRPNVDVVKLQKSGGV
VSRNAKVRQKARGYRIREYFYGPSNDLSPHSNVVNFGDLFIYRIGGGPQAPRSALPIGAE
PAADPTRLVPVSINRDLLHLVLAVSYADEPDQIISSNVAGFIYVTDVDMHRKKITYLAPC
AGELPSKYLIVGTLTWIEN

Transcript Sequence

Gene sequence data has not been registered.